Who







I am a PhD candidate in the Witt Lab at the University of New Mexico and a wildlife biologist at Los Alamos National Laboratory. I use natural history collections, field biology, and computation to broadly address the ecological and evolutionary implications of diverse trait-environment associations.

Research

Elevational Generalism

Most Andean birds inhabit narrow elevational ranges thought to be set by a combination of biological and environmental factors. Very few species inhabit more than 3,000 meters in elevation. Those that do must compensate for large shifts in temperature, UV exposure, and the partial pressure of oxygen. Are these exceptional species physiologically adapting in the face of gene flow, or are plastic and behavioral responses, allowing them to persist across diverse environmental conditions and preventing them from specializing on narrower elevation zones?

In Gadek et al. 2017 I found that elevational generalists are either in the process of diversifying, expanding across the gradient, or undertaking seasonal or resource-pulse-driven elevational migration, and that elevational generalism is an unstable and transient condition.

Conceptual Figure

Conceptual figure illustrating the three main mechanisms at play in maintaining or eroding elevational generalist's wide ranges.


Evolution of Elevational Ranges

The evolutionary history of neotropical birds has undoubtedly been influenced by Andean uplift, leaving us with current patterns of high diversity and endemism in and around the Andes. These species' modern elevational ranges represent cumulative histories of expansions and contractions in mountains over evolutionary timescales.

To anticipate how elevational ranges will respond to climate change in the near term, we must understand how they evolved. To this end, I ask: How did elevational ranges form and change over time? How rapidly have they shifted? Are upward and downward shifts symmetrically distributed across the elevation gradient? And how do patterns of range evolution differ among clades?

This work is being done in collaboration with Eli Stone and Selina Bauernfeind.

Downward Expansion

Study context describing elevational ranges of neotropical birds. (a) map of the study region with an elevation model at 30-second resolution. (b) Land area across the study area in 500-m elevation bins. (c) Upper elevation limits of 2,774 species in this study mapped onto a phylogeny (birdtree.org); avian families of over 100 species are highlighted in red. (d) Lower elevation limits and (e) upper elevation limits of the 2,774 species with median (solid bar) and 25% and 75% quantiles (dashed bars).


Plasticity and Adaptation During Extreme Elevational Transitions

Plastic responses to acute changes in elevation are well documented and shared across many vertebrates. Similarly, genetic adaptation to high-elevation environments often acts on predictable physiological pathways. But how do these processes interact, and how do they transition between one another?

To ask these questions, we sampled the entire Peruvian range of two co-distributed marsh birds ( Phleocryptes melanops & Tachuris rubrigastra). These birds have disjunct elevational ranges, inhabiting coastal marshes at sea level and high-elevation marshes above 4000 meters. Are the high elevation populations adapted(ing) to the dramatically lower oxygen availability? Or has gene flow and recent colonization failed to suppress short-term acclimatization responses? This work is in collaboration with Jessie Williamson.

Downward Expansion

Photograph of Many-colored Rush Tyrant (Tachuris rubrigastra) from Puerto Viejo, Peru, in 2016.


Malaria in Sky Islands

Avian malaria is a widespread chronic disease of birds caused by multiple Apicomplexan organisms. To understand how host and pathogen communities vary across the landscape, we surveyed birds and parasite communities among Southwestern sky islands and simulated null communities to compare against empirical data.

We found that parasite communities differed between sky islands relative to null community models, suggesting idiosyncratic colonization and extirpation dynamics. This work is in collaboration with Christopher Witt, Lisa Barrow, Jessie Williamson, Selina Bauernfeind, and Rosario Marroquin-Flores.

Downward Expansion

Figure modified from Barrow et al. 2021 showing observed (dashed lines) and expected Jaccard Index values. Expected values obtained from 10,000 randomly simulated communities. Illustrates how observed communities in two "sky islands" differ from expectations.


Tracheal Evolution in Sandhill Cranes

The sandhill crane (Grus canadensis ) is among the few bird species that exhibit tracheal elongation. Within this species, there is substantial size dimorphism between subspecies. Jones & Witt 2014 found that the smaller subspecies that undertake longer distance migrations had proportionally longer trachea hypothesized to make smaller birds sound bigger. I am interested in assessing the symmetry and strength of sexual dimorphism within sandhill cranes.

Crane trachea

Photo of sandhill crane trachea coiled within the bird's sternum.


Evolutionary and ecological drivers of microbe-host associations in the lung mycobiomes of birds

Microbiomes are being published at a rapid pace. Yet wild bird microbiomes and specifically their fungal components (mycobiomes) are largely undescribed. Furthermore, how microbiomes are structured by phylogenetic, geographic, and life history traits remains understudied. Baseline knowledge of the makeup of these communities and factors that affect their assembly and maintenance holds important implications for disease ecology, public health, and large-scale coevolutionary processes.

We are describing the first lung mycobiomes of birds and modeling the associations of phylogeny, morphology, and ecology with lung fungal communities. This project is in collaboration with Paris Hamm & Michael Mann utilizing samples collected and stored in the Museum of Southwestern Biology.

GDM

Global (dashed lines) and subsampled (solid lines) generalized dissimilarity models showing geographic, morphological, and phylogenetic predictors of fungal community dissimilarity. Figure shows (height of lines) that phylogenetic distance, hand-wing index, and maximum latitude of bird hosts explain the most dissimilarity among lung fungal communities

Publications


  1. The avian lung mycobiome: phylogenetic and ecological drivers of lung-fungal communities and their potential pathogens. Salazar-Hamm, P.S. ‡, Gadek, C.R.‡, Mann, M. A., Steinberg, M, Montoya, K. M., Behnia, M., Gyllenhaal, E. F., Brady, S. S., Takano, O. M., Williamson, J. L., Witt, C. C., and Natvig, D.O. ‡Equal contributions. In review. Preprint

  2. Taxonomy, nomenclature, and identification of the giant hummingbirds (Patagona spp.) (Aves: Trochilidae). Williamson, JL, Gadek, CR, Gyllenhaal, EF, Bauernfeind, SM, Bautista, EO, Baumann, MJ, Ricote, N, Marra, PP, Bozinovic, F, Singh, ND, and Witt, CC. In review. Preprint

  3. Extreme elevational migration spurred cryptic speciation in giant hummingbirds. Williamson, J.L., Gyllenhaal, E.F., Bauernfeind, S.M., Bautista, E., Baumann, M.J., Gadek, C.R., Marra, P.P., Ricote, N., Valqui, T., Bozinovic, F. and Singh, N.D., 2024. Proceedings of the National Academy of Sciences, 121(21), p.e2313599121. PDF

  4. Extraordinary levels of per- and poly-fluoroalkyl substances (PFAS) in vertebrate animal tissues at a New Mexico desert oasis: multiple pathways for wildlife and human exposure. Witt, CC, CR Gadek, J-L Cartron, MJ Andersen, ML Campbell, M Castro-Farías, EF Gyllenhaal, AB Johnson, J Malaney, KN Montoya, A Patterson, NT Vinciguerra, JL Williamson, JA Cook, and JL Dunnum (2024). Environmental Research 249: 118229. PDF

  5. First record of Austral Negrito (Lessonia rufa) for Peru. Schmidt, CJ, Gadek, CR, Bautista, E, Segura, M, Witt, CC, 2023. Boletín UNOP Vol 18. N° 1. PDF

  6. Blood variation implicates respiratory limits on elevational ranges of Andean birds. Ethan Linck, Jessie L. Williamson, Emil Bautista, Elizabeth J. Beckman, Phred M. Benham, Shane G. DuBay, L. Mónica Flores, Chauncey R. Gadek, Andrew B. Johnson, Matthew R. Jones, Jano Núñez-Zapata, Alessandra Quiñonez, C. Jonathan Schmitt, Dora Susanibar, Jorge Tiravanti C., Karen Verde-Guerra, Natalie A. Wright, Thomas Valqui, Jay F. Storz, and Christopher C. Witt The American Naturalist (2023) 201:5, 741-754

  7. Intra- and interspecific nest stacking in marsh-dwelling songbirds. Gadek, C. R., Williamson, J. L., & Witt, C. C. (2022). Biotropica, 54, 1131– 1136.

  8. Comparing community composition despite incomplete sampling and uneven abundance: a case study of sky-island haemosporidian parasites. Barrow, L. N., S. M. Bauernfeind, P. A. Cruz, J. L. Williamson, D. L. Wiley, J. E. Ford, M. J. Baumann, S. S. Brady, A. N. Chavez, C. R. Gadek, S. C. Galen, A. B. Johnson, X. M. Mapel, R. A. Marroquin-Flores, T. E. Martinez, J. M. McCullough, J. McLaughlin, and C. C. Witt. 2021. Oecologia. In Press.

  9. Why are tropical mountain passes “low” for some species? Genetic and stable‐isotope tests for differentiation, migration and expansion in elevational generalist songbirds. Gadek, C. R., S. D. Newsome, E. J. Beckman, A. N. Chavez, S. C. Galen, E. Bautista & C. C. Witt. 2017. Journal of Animal Ecology, 87: 741-753.

  10. Diversity, abundance, and host relationships of avian malaria and related haemosporidians in New Mexico pine forests. Marroquin-Flores, R. A., J. L. Williamson, A. N. Chavez, S. M. Bauernfeind, M. J. Baumann, C. R. Gadek, A. B. Johnson, J. M. McCullough, C. C. Witt, & L. N. Barrow. 2017. PeerJ, 5: e3700.

  11. An undergraduate laboratory class using CRISPR/Cas9 technology to mutate drosophila genes. Adame, Vanesa; Chapapas, Holly; Cisneros, Marilyn; Deaton, Carol; Deichmann, Sophia; Gadek, Chauncey; Lovato, TyAnna L; Chechenova, Maria B; Guerin, Paul; Cripps, Richard M; 2016. Biochemistry and Molecular Biology Education, 44, 3: 263-275.